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==Phylogenetic comparative methods== | |||
All organisms are linked together by the tree of life. We can use this tree along with trait data, to understand many aspects of biology: does specialization lead to increased speciation? do body size and brain size coevolve? how have genome sizes changed over time? and more. R has many functions to address such questions. This website has [[HowTo Table of Contents | tutorials]] on how to do these analyses in R and an [[HowTo/Taskview|overview]] of what is available in R. | |||
== Getting started == | |||
* [//www.mediawiki.org/wiki | *[[HowTo Table of Contents | Tutorials table of contents]] | ||
* [//www.mediawiki.org/wiki | |||
* [ | *[[HowTo/Taskview|Overview of analyses and packages available in R]] | ||
*[[HowTo wishlist | Wish list - let the community know what you would like to see available in R]] | |||
*[[HowTo UsefulLinks| Useful links]] | |||
*[http://stat.ethz.ch/mailman/listinfo/r-sig-phylo Mailing list] for asking questions about using and developing comparative methods in R. The mailing list is [http://dir.gmane.org/gmane.comp.lang.r.phylo archived here]. | |||
'''This wiki is not yet comprehensive; please help us to make it better!''' Consult the [[Writers_guide| Writers Guide]] for specifics on editing this wiki and the [http://meta.wikimedia.org/wiki/Help:Contents User's Guide] for information on using the wiki software. | |||
These pages grew out of a [http://www.nescent.org/wg_phyloinformatics/R_Hackathon_1 Hackathon on Comparative Methods in R] held at the National Evolutionary Synthesis Center (NESCent) 10-14 December 2007. | |||
== Getting started in Mediawiki == | |||
* [http://www.mediawiki.org/wiki/Manual:Configuration_settings Configuration settings list] | |||
* [http://www.mediawiki.org/wiki/Manual:FAQ MediaWiki FAQ] | |||
* [http://lists.wikimedia.org/mailman/listinfo/mediawiki-announce MediaWiki release mailing list] | |||
[[Special:Statistics | stats]] [[Special:Listusers | users]] | |||
Revision as of 17:37, 6 June 2016
Phylogenetic comparative methods
All organisms are linked together by the tree of life. We can use this tree along with trait data, to understand many aspects of biology: does specialization lead to increased speciation? do body size and brain size coevolve? how have genome sizes changed over time? and more. R has many functions to address such questions. This website has tutorials on how to do these analyses in R and an overview of what is available in R.
- Mailing list for asking questions about using and developing comparative methods in R. The mailing list is archived here.
This wiki is not yet comprehensive; please help us to make it better! Consult the Writers Guide for specifics on editing this wiki and the User's Guide for information on using the wiki software.
These pages grew out of a Hackathon on Comparative Methods in R held at the National Evolutionary Synthesis Center (NESCent) 10-14 December 2007.